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The basics of acrylamide

When it comes to creating polyacrylamide gels for electrophoresis, there’s a crucial ingredient that takes center stage – acrylamide. This simple organic compound is the cornerstone of PAGE (Polyacrylamide Gel Electrophoresis) gels, serving as the foundational building block. The magic of acrylamide lies in its unique polymerization properties. When mixed with a cross-linking agent, typically bis-acrylamide, and a radical initiator, acrylamide molecules link together to form a dense network of long chains within the gel matrix. This network creates a molecular sieve with precise pore sizes, which allows for the separation of biomolecules like proteins and nucleic acids based on their size and charge during electrophoresis. So, the next time you’re running a PAGE gel to unravel the mysteries of molecular biology, remember that it all begins with the humble yet indispensable acrylamide.